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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845270.1_cds_XP_016509286.1_22230
CDS Infomation

[gene=LOC107826772] [db_xref=GeneID:107826772] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2] [protein_id=XP_016509286.1] [location=join(86711..88058,88641..88769,88897..89078,89344..89554,89664..89901,90139..90289,90989..91303)] [gbkey=CDS]
Sequence

ATGTCTTCTCTCTTTTTCTTGCTCTTTGTACTCTCTTACTTCTCTCTAAAAAAACCTTTT
CCTTTTGTAACTGCACAGAAAAATTCAATTATTGGAAACACAATTGATGCAAATAAATGG
ATTACAATTGCCTCAACAATAGTTTCATCAGGTGGGAATTTTGAGATGGGATTCTTCACA
CCAGGTAATAATTCCAATTATTACATAGGCATATGGTACAAGAAGTTAAGTATACAAACT
GTTATTTGGGTAGCAAATAGAGAAACACCAGTTTCCATTTATGAAATGAATTTTGCAGAA
TTCAAGATTCAAAATGGAAACTTAGTTCTCCTCAATGGAACTAGACATATAATTTGGTCC
ACAAGTCTAAATTTCTCCACCAATTCTAATACTTCTCAAGTTGTAGCAACTTTATTTGAT
GATGGGAATTTGATATTGAGTAACGGAGATAGTAATAATTCAAGAAATCATCTATGGACA
AGTTTTGATCATCCATCTCATACGTTCATGCCCGGTTCAAAATTCGGGTACAACAAACGT
ACGAAACTGAAACAAGCTCTGATATCATGGAAGAACGCGAACGATCCTTCTCCTGGACCC
TTTACTCATGAAGTTAACATGGATAAATATAGTGGCCAAGGTGTTAATATGTGGAATCAT
AGTGTAATTTATTGGAATAGTGGACCTTGGACTGGTAACAATTTTACTGGTGTACCTTAC
CAACCAAATCCTATGTTTAATTACACATATGTTGACAATGATAATGAGGTTTATTATCAG
TACAATTTCCTTAATCCTGTACTTATATCAAGATTTATTATGGATTTCGATGGACAAACG
AAACAATTACTATGGATGGATAGCACGAACGATTGGAACGTGTTTTATACTGATCCGAAA
AAAGTTTGTGATGTTTTTGGTTATTGTGGAGCTTTTGGTACTTGTAATGAACTAAGCTCC
GCGGCTTCAGTATGTGATTGTTTGCCTGGTTTTACGCCTAAATCGAACGAAGATTGGAAT
TTGAAAAGTTTTTCTGGTGGATGTATGAGGAAAATGGGATTGAAATGTGGTAATTTTAGT
GTTGTTGATTGGGAGAAGGACAAGTTTTGGATGCAGAAAAATATGAGATTACCTGCAAAT
AATGTATCTGTGATAGTTCAGAATGAAGCTGAATGTGAAAAGACATGTTTAGAGAATTGT
GATTGTGTTGCCTATGCTTATAAAAATGGAGATGGATGTTTGATTTGGAGTGGAGAACTT
TTGAATTTGCAACAACTCTCACAAGATAATGCAAATGGAAGCACAATCTATGTTAGGCTT
GCAGCTTCTGAATTTTCAAGTAACAAAGATGAACAGCAAAAGCAAACATCAAAAAAGCTG
AAAATTGCCATTCCTATTGGTGTAATTGCTGCAGTTCTCTTTCTTTCATGCGTTTCCTAC
ATATATTATAGAAAAAGAAGAAGCGCAAAAATCAAAGAGAATACTACAAAATCTCTCATG
CAAAATACTGAAGGAGAAGCAGAGCTAATTGATATTCAAGATGATGATAAAGGCAATATT
GAAGTTCCATTCTTCAGTTTTGAAAGCATATTAATGGCAACAGATAACTTCTCAGAACAA
AATAAGCTTGGGCAAGGGGGATTTGGTCCTGTTTACAAGGGTATATTTTCAGGAGGAAGA
GAAATTGCAGTGAAAAGGCTATCAAGTCATTCTGGACAAGGGATAAATGAATTTAAGAAT
GAAGTAATGTTGATTGCAAGGCTTCAACATCGAAATCTTGTTAGACTTTTGGGTTATTGC
ATTCAATCAAGTGAAAAGATTTTACTCTACGAGTATATGGCAAACAAAAGTTTAGACACC
TTCATATTTGATCGAAAACTATGCATGAAATTGGATTGGAGGAAGAGATTTGAAATTATA
GAGGGAATTGCTAGAGGACTTCTTTATCTACACTATGACTCAAGGTTAAGGATCATTCAT
AGAGATCTCAAAACAAGTAATATATTATTAGATGAAGAGTTGAACCCAAAAATATCAGAT
TTTGGCTTAGCAAGGGTTGTTGAAGGGAAAATTACACAAGCAAACACAAATAAAGTGGTT
GGAACCTATGGCTATATGGCTCCAGAATATGCAATAGATGGATTATTTTCAATTAAGTCA
GATGTATTTAGTTTTGGAATTGTTATACTGGAGATCATCAGTGGAAGAAGAAATACTGGA
TTTTTTCACCAAGAAGAAGCATCAAACCTCTTAGGCCATGCATGGAGATTATGGAAAGAA
GATAAGGCAATGGACTTAGTGGATCAATCACTACAAGAATCATGCAACAAAGAAGAAGCA
ATTAAATGCCTTAATGTTGGGCTTTTGTGTGTACAAGAAGATCCAAAAGATCGTCCCAAC
ACAACAAATATAATAATGATGCTTGGTAGTGAAAATATTATTTCTCTTCCAAGGCCAAAT
CAACCAGCTTTTATGACAAGAAAATGTGCTAATAACACATCTTCTTCTTCTGCTACTAAA
TCAGATGTTGTTTCCAATAATGAGCTGACTGTCACCATTGAAACAGGTCGATAA

Peptide Sequence

PEP ID

XP_016509286.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Nicotiana tabacum]
Sequence

MSSLFFLLFVLSYFSLKKPFPFVTAQKNSIIGNTIDANKWITIASTIVSSGGNFEMGFFT
PGNNSNYYIGIWYKKLSIQTVIWVANRETPVSIYEMNFAEFKIQNGNLVLLNGTRHIIWS
TSLNFSTNSNTSQVVATLFDDGNLILSNGDSNNSRNHLWTSFDHPSHTFMPGSKFGYNKR
TKLKQALISWKNANDPSPGPFTHEVNMDKYSGQGVNMWNHSVIYWNSGPWTGNNFTGVPY
QPNPMFNYTYVDNDNEVYYQYNFLNPVLISRFIMDFDGQTKQLLWMDSTNDWNVFYTDPK
KVCDVFGYCGAFGTCNELSSAASVCDCLPGFTPKSNEDWNLKSFSGGCMRKMGLKCGNFS
VVDWEKDKFWMQKNMRLPANNVSVIVQNEAECEKTCLENCDCVAYAYKNGDGCLIWSGEL
LNLQQLSQDNANGSTIYVRLAASEFSSNKDEQQKQTSKKLKIAIPIGVIAAVLFLSCVSY
IYYRKRRSAKIKENTTKSLMQNTEGEAELIDIQDDDKGNIEVPFFSFESILMATDNFSEQ
NKLGQGGFGPVYKGIFSGGREIAVKRLSSHSGQGINEFKNEVMLIARLQHRNLVRLLGYC
IQSSEKILLYEYMANKSLDTFIFDRKLCMKLDWRKRFEIIEGIARGLLYLHYDSRLRIIH
RDLKTSNILLDEELNPKISDFGLARVVEGKITQANTNKVVGTYGYMAPEYAIDGLFSIKS
DVFSFGIVILEIISGRRNTGFFHQEEASNLLGHAWRLWKEDKAMDLVDQSLQESCNKEEA
IKCLNVGLLCVQEDPKDRPNTTNIIMMLGSENIISLPRPNQPAFMTRKCANNTSSSSATK
SDVVSNNELTVTIETGR

Transcript Sequence

Gene sequence data has not been registered.